Merge branch 'master' of https://gitext.gfz-potsdam.de/arthus/corbass

README.md

@@ -41,7 +41,7 @@ graph LR;
 `CORBASS` uses parameter files, which include among other things a link to 
 datasets, in a format similar to the [GEOMAGIA](http://geomagia.gfz-potsdam.de/) 
 output. Thus a first step is to create such a file for your data. You can find
-an [example](Example_Parfile.py)
+an [example](examples/Example_Parfile.py)
 in the [*examples* section].
 
 Once you have a parameter file, the recommended way to run `CORBASS` is to use
@@ -63,7 +63,7 @@ using the `evaluation` module.
 If you want to use the individual modules, you can find Jupyter notebooks for
 each module in the [*examples* section].
 
-[*examples* section]: (examples)
+[*examples* section]: examples
 
 # Installation
 0. Clone the repository 

examples/Example_4_Run.ipynb

@@ -49,20 +49,8 @@
       "<corbass>/CORBASS/corbass/evaluation.py:215: RuntimeWarning: covariance is not positive-semidefinite.\n",
       "  for it in par_samps]\n",
       "Exploring 1550, this may take a while...\n",
-      "100% (15625 of 15625) |##################| Elapsed Time: 0:29:14 Time:  0:29:14\n"
-     ]
-    },
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
-      "Integrating 1550, this may take a while...\n"
-     ]
-    },
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
+      "100% (15625 of 15625) |##################| Elapsed Time: 0:29:14 Time:  0:29:14\n",
+      "Integrating 1550, this may take a while...\n",
       "100% (3375 of 3375) |####################| Elapsed Time: 1:08:58 Time:  1:08:58\n"
      ]
     }
@@ -104,10 +92,10 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "\u001b[0m\u001b[00mexample_1450_cmbfields.txt\u001b[0m  \u001b[00mexample_1450_inte.npz\u001b[0m       \u001b[00mexample_1550_fields.txt\u001b[0m\r\n",
-      "\u001b[00mexample_1450_coeffs.txt\u001b[0m     \u001b[00mexample_1550_cmbfields.txt\u001b[0m  \u001b[00mexample_1550_inte.npz\u001b[0m\r\n",
-      "\u001b[00mexample_1450_expl.npz\u001b[0m       \u001b[00mexample_1550_coeffs.txt\u001b[0m\r\n",
-      "\u001b[00mexample_1450_fields.txt\u001b[0m     \u001b[00mexample_1550_expl.npz\u001b[0m\r\n"
+      "example_1450_cmbfields.txt    example_1450_inte.npz         example_1550_fields.txt\n",
+      "example_1450_coeffs.txt       example_1550_cmbfields.txt    example_1550_inte.npz\n",
+      "example_1450_expl.npz         example_1550_coeffs.txt\n",
+      "example_1450_fields.txt       example_1550_expl.npz\n"
      ]
     }
    ],

examples/README.md

@@ -4,7 +4,7 @@ As stated in the repository's [main readme file](https://gitext.gfz-potsdam.de/a
 To demonstrate the `CORBASS` workflow, we provide an [example parameter file](Example_Parfile.py).
 The recommended way to evaluate this parameter file is to use
 ```console
-(CORBASS)$ python run.py examples/Example_Parfile.py`.  
+(CORBASS)$ python run.py examples/Example_Parfile.py
 ```
 
 Note that this may take a while. We also provide a [notebook](Example_4_Run.ipynb), illustrating this procedure.