add 1 shell script for running split-inserter.js

bin/api-caller-core-section-find.sh

@@ -29,7 +29,12 @@ do
 done
 
 echo Finding cores and respective section counts 
-
+echo ""
+node_version=$(node -v | grep -P v1[456789])
+if [[ -z "$node_version" ]]; then
+    echo "You must use Node v14+ to run the split-inserter script"
+    exit 1
+fi
 section_counts=$(node $debug ../src/sectioncount-of-cores-of-single-hole.sh -h $h);  
 
 outfile=section_counts.json

bin/api-caller-core-section-insert.sh

@@ -30,6 +30,13 @@ fi
 
 export NVM_DIR="$HOME/.nvm"
 [ -s "$NVM_DIR/nvm.sh" ] && . "$NVM_DIR/nvm.sh"  # This loads nvm
+
+node_version=$(node -v | grep -P v1[456789])
+if [[ -z "$node_version" ]]; then
+    echo "You must use Node v14+ to run the split-inserter script"
+    exit 1
+fi
+
 echo Inspecting cores and their core sections  >&2 
 
 cores_count=$(jq  '.meta.totalCount' < $infile)

bin/api-caller-sectionsplit-insert.sh

+#!/usr/bin/env bash
+# knb 20200714
+# add respective fake sections to mDIS
+OPTIND=1
+declare core=""
+declare debug=""
+declare infile=section_counts.json
+
+########## options and error handling 
+
+while getopts ':c:d:' opt 
+do
+    case "$opt" in 
+        c)  core="${OPTARG}" 
+     ;;
+        d)  debug="--inspect --inspect-brk"  
+     ;;
+        *) echo "Usage: $0 [ -c (core) | -d] ( -d activates Node's chrome debugger)" && exit 0 ;;
+    esac 
+done
+set -e
+export NVM_DIR="$HOME/.nvm"
+[ -s "$NVM_DIR/nvm.sh" ] && . "$NVM_DIR/nvm.sh"  # This loads nvm
+
+if [[ -z "$core" ]]; then
+  echo "Argument -c (core-id) cannot be empty!"   >&2 
+  sleep 4
+  exit 1
+fi
+
+node_version=$(node -v | grep -P v1[456789])
+if [[ -z "$node_version" ]]; then
+    echo "You must use Node v14+ to run the split-inserter script"
+    exit 1
+fi
+
+########## main script 
+echo Core $c: Creating split-sections from Whole-round sections   >&2 
+
+
+if [[ "$cores_count" -gt 0  ]]; then
+    #for i in $(seq 13 100)  ; do echo $i; node split-inserter.js -c $i ; done
+    node $debug ../split-inserter.js -c $i done
+else 
+    echo "No core or no sections found for core $i."
+    echo "Core number must be the autoincrement-id of that core."
+    echo "Do not use value of combined_id or a different id-column"
+fi

src/split-inserter.js

 #!/usr/bin/env node
 "use strict"
+// knb July 2020
+// use Node v14+
+// insert section-splits into mDIS database
 // either - for a single core (which contains 1-4 sections)
 // TODO
 // or read in from infile (created by 'sectioncount-of-cores-of-single-hole.js')
@@ -9,16 +12,14 @@
             "combined_id": "2739_A_A_1",
             "core_id": 1,
             "section_count": 4,
-            "recovered_length": 2.73,
-            "expedition_id": 11,
-            "site_id": 4,
-            "hole_id": 11
+            
     },    ] } */
-// insert section-splits into mDIS database
 // call this script with:
 // ../api-caller-split-inserter.sh
 // or
-// node src/split-inserter.js
+// node src/split-inserter.js -c 123
+// or
+// for i in $(seq 101 200)  ; do echo $i; node split-inserter.js -c $i ; done
 const config = require("./config.js")
 const axios = require("axios")
 const axutil = require("./axios-util.js")