HabitatSampler merge requestshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests2022-10-13T15:32:45+02:00https://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/43Unitests2022-10-13T15:32:45+02:00Romulo Pereira GoncalvesUnitestsUnit and Integration testsJohannes KnochJohannes Knochhttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/40SVM predict omits NaN on the prediction.2022-05-30T22:24:58+02:00Romulo Pereira GoncalvesSVM predict omits NaN on the prediction.Closes issue #64Closes issue #64Unit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalveshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/39Remove version restriction2022-05-12T14:24:50+02:00Romulo Pereira GoncalvesRemove version restrictionUnit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalveshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/38Issue#392022-05-02T11:23:43+02:00Romulo Pereira GoncalvesIssue#39Closes issue #39Closes issue #39Unit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalveshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/22Check if either kml or kmz files exist.2021-07-07T18:18:52+02:00Romulo Pereira GoncalvesCheck if either kml or kmz files exist.Unit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalveshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/20We are saving run1 object and not run.2021-07-07T15:02:28+02:00Romulo Pereira GoncalvesWe are saving run1 object and not run.Unit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalveshttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/19renamed the function and output names and put in missing packages for functio...2021-07-02T16:37:56+02:00Johannes Knochrenamed the function and output names and put in missing packages for functions usedUnit and Integration testsJohannes KnochJohannes Knochhttps://git.gfz-potsdam.de/habitat-sampler/HabitatSampler/-/merge_requests/2Docker2021-02-04T09:53:50+01:00Romulo Pereira GoncalvesDockerWith this merge requests we are now able to create a docker image for HabitatSampler.
In the `docker` directory there is a script to build the image and another one to start a docker container. The script to start a docker container all...With this merge requests we are now able to create a docker image for HabitatSampler.
In the `docker` directory there is a script to build the image and another one to start a docker container. The script to start a docker container allows the user to launch either a bash console to start an R instance or a jupyter-lab to run notebooks.
To be able to run HabitatSampler with less resources as possible we now delete the main objects after their last utilization and call R garbage collector `gc(full = TRUE)`. Furthermore, extra arguments were added to the function `multi_Class_Sampling`:
* save_runs : an Habitat object and extra info (to restart a run) is saved (default TRUE)
* max_num_cores : maximum number of cores for parallelism (default 5)
Since we can't launch a web-browser from a docker container, the user can now decide if the images should be either plot via a browser or plotted inline in a notebook. In both cases the interactive plot is saved as a html file in disk.
* plot_on_browser : plot on the browser or inline in a notebook (default TRUE)
All documentation was improved according to the above changes.Unit and Integration testsRomulo Pereira GoncalvesRomulo Pereira Goncalves