Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Habitat Sampler
HabitatSampler
Commits
99f173d1
Commit
99f173d1
authored
Jun 09, 2021
by
Romulo Pereira Goncalves
Browse files
Remove sudo
parent
fdf73db2
Changes
1
Hide whitespace changes
Inline
Side-by-side
docker/start_docker.sh
View file @
99f173d1
...
...
@@ -50,12 +50,12 @@ demo_data_foler="$(realpath ../demo/)"
jupyter_lab_port
=
8888
docker_jupyterlab_port
=
8888
sudo
docker
rm
-f
${
container_name
}
docker
rm
-f
${
container_name
}
echo
"Starting HaSa container, please add the input files to
${
input_dir_
}
and read the results from the
${
output_dir_
}
"
if
[
"
${
jupyter_notebook
,,
}
"
=
"true"
]
then
sudo
docker run
-it
--name
${
container_name
}
--privileged
\
docker run
-it
--name
${
container_name
}
--privileged
\
--oom-kill-disable
--memory
=
12g
--memory-swap
=
14g
--net
=
host
\
-p
$jupyter_lab_port
:
$docker_jupyterlab_port
\
-v
${
input_dir_
}
:
${
in_data_folder
}
\
...
...
@@ -64,7 +64,7 @@ then
-v
${
demo_dir
}
:
${
demo_data_folder
}
${
runner_tag
}
\
bash
-i
-c
"cd /home/hasa; jupyter-lab --ip 0.0.0.0 --no-browser --allow-root demo/"
else
sudo
docker run
-it
--name
${
container_name
}
-u
1000:1000
--privileged
\
docker run
-it
--name
${
container_name
}
-u
1000:1000
--privileged
\
--oom-kill-disable
--memory
=
12g
--memory-swap
=
14g
--net
=
host
\
-v
${
input_dir_
}
:
${
in_data_folder
}
\
-v
${
tmp_dir_
}
:
${
tmp_data_folder
}
\
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment