Updated minimal version of py_tools_ds. This fixes an issue where pixelToLatLon returned Lon/Lat instead of Lat/Lon.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Replaced calls of sorted_nicely with new dependency 'natsort'. Fixed circular imports. Fixed AssertionError caused by new version of pyproj.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Fixed copy/paste error in license headers. Added .h5 files to GitLFS. Fixed missing bracket. Updated HISTORY.rst and version info.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

Fixed buggy handling of acq_datetime when recreating GMS_object from disk.
Fixed 'str' object has no attribute 'month'.

Added option 'write_ENVIclassif_cloudmask' (fixes issue #72).

-> required to revise metadata storage for layer dependent metadata (they are now stored as dicts instead of lists)

Implemented process locks to avoid CPU/RAM overload on case multiple GMS jobs are running on the same host.

Added config parameter 'max_parallel_reads_writes' to limit number of read/writes or to enable/disable IO locks, respectively.

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Fixed issue #50 (Invalid job progress statistics in case a subsystem fails after another one of the same scene ID already succeeded in the same mapper) by adding class attribute GMS_object.proc_status_all_GMSobjs and GMS_object.proc_status() property. Added gms_object.update_proc_status() decorator.
Revised exception handler. Improved test_exception_handler module.
Fixed a severe bug that copied the same dataset list to all subsequent process controllers.
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Spectral homogenization via Linear Regression now working with proper handling of LayerBandsAssignments.
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Renamed option conversion_type_optical to target_radunit_optical and conversion_type_thermal to target_radunit_thermal. Keys in provided JSON file are now optional. Bugfixes.
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Fixed AssertionError 'exactly 4 image corners must be present within the dataset'. Updated version info.
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Deleted deprecated cloud masking algorithms based on py_tools_ah/classical_bayesian because they dont work anymore and cloud masking is now implemented in SICOR.
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Refactored GEOPROCESSING, METADATA, Input_reader, Output_writer and SpatialIndexMediator. Deleted a lot of deprecated/unused code:
GEOPROCESSING:
- deleted many unused functions written by Robert Behling
L1A_P:
- deleted decompress()
- deleted Layerstacking()
L1B_P:
- deleted functions related with SIFT/Orfeo toolbox co-registration
L2A_P:
- deleted get_DESHIFTER_configs()
- deleted envifilehandling.py
- deleted SRF_DB_2_PKL.py (content moved to output_writer
gms_object:
- deleted calc_mask_nodataOLD()
METADATA:
- deleted some unused functions written by Robert Behling
- deleted sandbox module
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Added first version of SpectralResampler1D incl. test module 'test_spectral_resampler'. Some PEP8 editing.
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- Revised config.Job -> now features an own configuration for test mode. Passing arguments from outside is now much easier.
- Refactored some attributes of config.Job.
- added cloud classifiers for the included test data
- misc.exceptions: added GMSConfigParameterError
- misc.path_generator: revised get_path_cloud_class_obj(): merged subfolders for cloud classifiers on disk
- processing.pipeline: refactored 'exec__...' to 'exec_...'
- tests.test_geomultisens: removed superfluous paths configs
- removed cloud_classifiers from .gitignore
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Revised DEM creation. Added io.Input_Reader.DEM_Creator (now with fallback to ASTER); removed deprecated io.Input_Reader.get_dem_by_extent(). Added test_input_reader.py. Added ASTER DEM test data.
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