Commits · f6c00fb30ceb575bba1e880d80d51777301ba965 · geomultisens / gms_preprocessing

25 Sep, 2020 3 commits

Caught ValueError: I/O operation on closed file within GMS_logger.__del__.... · f6c00fb3

Daniel Scheffler authored Sep 25, 2020


Caught ValueError: I/O operation on closed file within GMS_logger.__del__. Fixed a static TLS ImportError during runtime of SICOR when scikit-learn>0.22 is imported. Added missing requirements numba and llvmlite to environment_gms_preprocessing.yml.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

f6c00fb3

Updated list of compatible Python versions. · 3170a358
Daniel Scheffler authored Sep 25, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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3170a358
Deactivated explicit table download for SICOR (should now be included in SICORs setup.py). · 8bc30558
Daniel Scheffler authored Sep 25, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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8bc30558

18 Sep, 2020 6 commits
- Added missing test datasets. · 05bd101a
  Daniel Scheffler authored Sep 18, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  05bd101a
- Merge branch 'bugfix/adapt_to_newer_env' into 'master' · 4de2c5c8
  Daniel Scheffler authored Sep 18, 2020
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Bugfix/adapt to newer env

See merge request !10
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  4de2c5c8
- Added missing test datasets. · 2522b6c2
  Daniel Scheffler authored Sep 18, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  2522b6c2
- Updated minimal version of geoarray. · 01d9b3c1
  Daniel Scheffler authored Sep 18, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  01d9b3c1
- Updated geoarray during test_gms_preprocessing CI job. · 6e89bdff
  Daniel Scheffler authored Sep 18, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  6e89bdff
- Created a new job for Test_Landsat8_PreCollectionData. Updated minimal version of geoarray. · 5444cb64
  Daniel Scheffler authored Sep 18, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  5444cb64
17 Sep, 2020 3 commits
- Recreated test dataset for Test_Landsat8_PreCollectionData. Replaced two... · b75554a8
  Daniel Scheffler authored Sep 17, 2020
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Recreated test dataset for Test_Landsat8_PreCollectionData. Replaced two os.system calls with subcall_with_output.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  b75554a8
- Fixed syntax. · 5142e464
  Daniel Scheffler authored Sep 17, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  5142e464
- Included SICOR download_tables into test_gms_preprocessing. · 52c15f2d
  Daniel Scheffler authored Sep 17, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  52c15f2d
16 Sep, 2020 6 commits

Added scipy version pinning due to SICOR issue #63. · db3f8e05
Daniel Scheffler authored Sep 16, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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db3f8e05

Replaced GMS_object._numba_array_merger() with GMS_object._merge_arrays which... · edbe653c

Daniel Scheffler authored Sep 16, 2020


Replaced GMS_object._numba_array_merger() with GMS_object._merge_arrays which does not use numba (and is much faster). Removed numba dependency. Updated HISTORY.rst.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

edbe653c

Fixed DeprecationWarning. · 13454d41
Daniel Scheffler authored Sep 16, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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13454d41
Fixed logging issue. Pinned Python version to 3.7+. · 94ea2191
Daniel Scheffler authored Sep 16, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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94ea2191
Fixed logging issue. Pinned Python version to 3.7+. · b73849af
Daniel Scheffler authored Sep 16, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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b73849af

Fixed UnicodeEncodeError while writing ENVI headers. Moved scipy imports from... · 05242550

Daniel Scheffler authored Sep 16, 2020


Fixed UnicodeEncodeError while writing ENVI headers. Moved scipy imports from module level to function level to avoid 'static TLS' ImportError. Fixed gdal_warp call within DEM_Creator class. Fixed issues while overwriting projections.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

05242550

15 Sep, 2020 3 commits

Replaced calls of sorted_nicely with new dependency 'natsort'. Fixed circular... · 51d8c6c2

Daniel Scheffler authored Sep 15, 2020


Replaced calls of sorted_nicely with new dependency 'natsort'. Fixed circular imports. Fixed AssertionError caused by new version of pyproj.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

51d8c6c2

Added missing slash. · d48b5e78
Daniel Scheffler authored Sep 15, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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d48b5e78
Replaced deprecated HTTP links. · 54b2b368
Daniel Scheffler authored Sep 15, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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54b2b368

05 Sep, 2020 1 commit
- Pinned scikit-learn due to spechomo classifiers. · 5c15f6b0
  Daniel Scheffler authored Sep 05, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  5c15f6b0
04 Sep, 2020 3 commits
- Re-added git URL for spechomo as it is not yet on PyPi. · b98c229e
  Daniel Scheffler authored Sep 04, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  b98c229e
- Fixed wrong package name. · eca62144
  Daniel Scheffler authored Sep 04, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  eca62144
- Use the PyPi version of ecmwf-api-client-python. · 7ce7d4ea
  Daniel Scheffler authored Sep 04, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  7ce7d4ea
03 Sep, 2020 1 commit
- Updated CI setup files, environment_gms_preprocessing.yml and .gitlab-ci.yml. · 4928143f
  Daniel Scheffler authored Sep 03, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  4928143f
06 Apr, 2020 1 commit
- Updated HISTORY.rst and version info. · 92562eb9
  Daniel Scheffler authored Apr 06, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  92562eb9
04 Apr, 2020 3 commits
- Merge branch 'bugfix/fix_noAC_spectral_homgenization' into 'master' · ec93cfac
  Daniel Scheffler authored Apr 04, 2020
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Bugfix/fix no ac spectral homgenization

See merge request !9
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  ec93cfac
- Input radiometric unit of spectral homogenization is now checked. Linear... · 862a2aca
  Daniel Scheffler authored Apr 04, 2020
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Input radiometric unit of spectral homogenization is now checked. Linear interpolation is used if its not BOA_Ref.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  862a2aca
- Fixed fallback algorithm within spectral homogenization. · 6d6894f1
  Daniel Scheffler authored Apr 04, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  6d6894f1
02 Apr, 2020 3 commits

Added .tar.gz-Files to Git LFS. · f389497c
Daniel Scheffler authored Apr 02, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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f389497c
Revised previous commit. · 6e5184c9
Daniel Scheffler authored Apr 02, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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6e5184c9

Removed spechomo classifiers from gms_preprocessing/database as they are now... · 2d914560

Daniel Scheffler authored Apr 02, 2020


Removed spechomo classifiers from gms_preprocessing/database as they are now included in external spechomo library. Removed parameter 'path_SRFs' from options file because SRFs are now provided by external pyrsr library. Removed 'RR' as possible spechomo_method. Updated HISTORY.rst and version info.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

2d914560

01 Apr, 2020 1 commit
- Pages now expire after 10 days instead of 30 days. · 7f2e07c5
  Daniel Scheffler authored Apr 01, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  7f2e07c5
31 Mar, 2020 6 commits
- Fixed copy/paste error in license headers. Added .h5 files to GitLFS. Fixed... · ed5527f0
  Daniel Scheffler authored Mar 31, 2020
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Fixed copy/paste error in license headers. Added .h5 files to GitLFS. Fixed missing bracket. Updated HISTORY.rst and version info.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  ed5527f0
- Merge branch 'enhancement/separate_sensorspecs' into 'master' · 7326daf6
  Daniel Scheffler authored Mar 31, 2020
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Enhancement/separate sensorspecs

See merge request !8
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  7326daf6
- Removed 'maxtasksperchild=1' from Pool. · cf74b030
  Daniel Scheffler authored Mar 31, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  cf74b030
- Added 'maxtasksperchild=1' to Pool. · 2747586a
  Daniel Scheffler authored Mar 31, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  2747586a
- Updated minimal version of pyrsr. · e375d38a
  Daniel Scheffler authored Mar 31, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  e375d38a
- Updated HISTORY.rst. Updated version info. · 4434afa4
  Daniel Scheffler authored Mar 31, 2020
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Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>
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  4434afa4