Renamed SERA_mapping_admin_units_to_cells_add_GHS to include from_HDF5

GDE_config_file_TEMPLATE.ini

@@ -202,7 +202,7 @@ occupancy_cases = Res, Com, Ind
 # Countries to process (if many, separate with comma and space):
 countries = Greece
 
-[SERA_mapping_admin_units_to_cells_add_GHS]
+[SERA_mapping_admin_units_to_cells_add_GHS_from_HDF5]
 ghs_input_filename = FILENAME.hdf5
 
 [SERA_mapping_admin_units_to_cells_add_Sat]

docs/02_Execution.md

@@ -18,7 +18,7 @@ The order in which the scripts in the present repository need to be run to produ
 2. Run `OBM_assign_cell_ids_and_adm_ids_to_footprints.py`
 3. Run `SERA_create_HDF5_metadata.py`
 4. Run `SERA_mapping_admin_units_to_cells.py`
-5. Run `SERA_mapping_admin_units_to_cells_add_GHS.py` (if GHS criterion desired)
+5. Run `SERA_mapping_admin_units_to_cells_add_GHS_from_HDF5.py` (if GHS criterion desired)
 6. Run `SERA_mapping_admin_units_to_cells_add_GPW.py` (if GPW criterion desired)
 7. Run `SERA_mapping_admin_units_to_cells_add_Sat.py` (if Sat or Sat_mod criterion desired)
 8. Run `SERA_distributing_exposure_to_cells.py` with the desired distribution method.

docs/04_Core_Scripts.md

@@ -83,11 +83,11 @@ This code determines the mapping between the administrative units used in SERA a
 It goes per country and, within each country, per administrative unit. All three occupancy cases (Res, Com, Ind) are considered together because the code groups together the cases for which the administrative level at which the exposure models are defined is the same (otherwise there would be a lot of repeated processing). This code adds and/or updates entries to the tiles database. The fields that are written by this code are: `cell_id`, `country`, `occupancy`, `adm_level`, `adm_id`, `area` and `geom`. Each entry of the table is a cell-admin unit intersection for a particular occupancy type.
 
 
-# SERA_mapping_admin_units_to_cells_add_GHS.py
+# SERA_mapping_admin_units_to_cells_add_GHS_from_HDF5.py
 
 ## Configurable parameters:
 
-The parameter that needs to be specified under the `SERA_mapping_admin_units_to_cells_add_GHS` section of the configuration file is:
+The parameter that needs to be specified under the `SERA_mapping_admin_units_to_cells_add_GHS_from_HDF5` section of the configuration file is:
 
 - ghs_input_filename = Name of the HDF5 file with a 10-arcsec grid that is aligned with ours and contains density (0-100%) values of built-up area (see below).
 

docs/guide_to_use_of_config_file.csv

@@ -18,7 +18,7 @@ SERA_exploration_investigate_macro_taxonomies,Y,Y,N,N,N,N,N,N
 SERA_exploration_longest_strings,N,Y,N,N,N,N,N,N
 SERA_exploration_summarise_columns_in_full_CSV_files,Y,Y,N,N,N,N,N,N
 SERA_mapping_admin_units_to_cells,Y,Y,N,Y,N,N,N,N
-SERA_mapping_admin_units_to_cells_add_GHS,N,Y,N,Y,N,N,N,Y
+SERA_mapping_admin_units_to_cells_add_GHS_from_HDF5,N,Y,N,Y,N,N,N,Y
 SERA_mapping_admin_units_to_cells_add_GPW,N,Y,N,Y,N,N,N,Y
 SERA_mapping_admin_units_to_cells_add_Sat,Y,Y,N,Y,N,N,N,Y
 SERA_testing_compare_visual_output_vs_OQ_input_files,Y,Y,N,N,N,N,N,N