Moved docker setups for basic gms dependencies to external project.

tests/CI_docker/build_conda_pyenv.sh

-#!/usr/bin/env bash
-
-context_dir="./context"
-dockerfile="conda_pyenv.docker"
-tag="conda_pyenv:pinned_v0.1"
-
-echo "#### Build basic pyenv docker image"
-sudo docker rmi ${tag}
-sudo docker build -f ${context_dir}/${dockerfile} -m 20G -t ${tag} ${context_dir}

tests/CI_docker/context/conda_pyenv.docker

-FROM centos:7
-# matplotlib requires freetype, freetype-devel, libpng-devel under centos
-# scikit-image requires blas-devel, lapack-devel, atlas-devel under centos
-RUN yum update -y && \
-    yum install -y wget vim bzip2 gcc gcc-c++ make libgl1-mesa-glx mesa-libGL qt5-qtbase-gui git nano tree gdb
-
-ENV miniconda_dl 'Miniconda3-latest-Linux-x86_64.sh'
-ENV envconfig 'environment_pinned_v0.1.yml'
-ENV git_lfs_v='2.1.1'
-
-RUN /bin/bash -i -c "cd /root; wget https://repo.continuum.io/miniconda/$miniconda_dl ; \
-    bash -i /root/$miniconda_dl -b ; \
-    rm -f /root/$miniconda_dl"
-
-# copy some needed stuff to /root
-COPY *.yml /root/
-
-# create an environment with all packages specified in $envconfig
-RUN /bin/bash -i -c "source /root/miniconda3/bin/activate ; \
-    conda env update -f /root/$envconfig"
-
-# install git lfs
-RUN /bin/bash -i -c "curl -s https://packagecloud.io/install/repositories/github/git-lfs/script.rpm.sh | bash"
-
-# installing git large file support, see here: https://git-lfs.github.com/ , change version number below for future upgrades
-RUN /bin/bash -i -c "wget https://github.com/git-lfs/git-lfs/releases/download/v${git_lfs_v}/git-lfs-linux-amd64-${git_lfs_v}.tar.gz; \
-    tar -zxvf git-lfs-linux-amd64-${git_lfs_v}.tar.gz; \
-    cd git-lfs-${git_lfs_v}; \
-    bash ./install.sh"

tests/CI_docker/context/environment_pinned_v0.1.yml

-name: py_tools_ds
-
-channels: &id1
-  - http://conda.anaconda.org/ioam  # only for holoviews
-  - http://conda.anaconda.org/conda-forge
-
-dependencies:
-  - python=3.*.*
-  - pyqt=5.6.0
-  - numpy=1.13.3
-  - gdal=2.1.4
-  - scikit-image=0.13.0
-  - rasterio=0.36.0
-  - pyproj=1.9.5.1
-  - icu=58.*
-  - lxml=4.1.0
-  - geopandas=0.3.0
-  - ipython
-  - pip:
-    - dicttoxml
-    - jsmin
-    - cerberus
-    - pyprind
-    - pint
-    - iso8601
-    - tqdm
-    - mpld3
-    - sphinx-argparse
-    - six
-    - spectral
-    - flake8
-    - pycodestyle
-    - pylint
-    - pydocstyle
-    - nose
-    - nose2
-    - nose-htmloutput
-    - coverage
-    - rednose

tests/CI_docker/context/py_tools_ds_ci.docker

-FROM conda_pyenv:pinned_v0.1
+FROM gms_base_centos:pinned_v0.1
+
+# copy some needed stuff to /root
+COPY *.yml /root/
+
+RUN /bin/bash -i -c "\
+    source /root/miniconda3/bin/activate ; \
+    conda env update -n root -f /root/environment_py_tools_ds.yml"