Moved several functions to py_tools_ds. Removed deprecated functions. Removed io and utilities modules.

Revised error handling and added additional check for projection. Some PEP8-editing. Test artifacts are now always saved.

Refactored command line interface 'arosics.py' to 'arosics_cli.py' to fix import issues. Added 'features' to README.rst.

updated __version__ and __versionalias__

Revised imports within console argument parser and __init__.py; refactored 'deshifted' keyword of CoReg.COREG.show_matchWin() to 'after_correction'.

arosics.COREG_LOCAL / bin/coreg.cmd:
- added options 'min_reliability', 'rs_max_outlier', 'rs_tolerance'

arosics.TiePointGrid.TiePointGrid:
- __init__(): added 'outlDetect_settings'

updated __version__ and __versionalias__

components.CoReg.COREG:
- __init__(): now accepts also integer values as resampling techniques

components.DeShifter:
- revised _dict_rspAlg_rsp_Int

coreg_cmd:
- added new parameters for adjusting resampling technique

updated __version__

components.CoReg.COREG:
- changed default value of window size to 256 px

components.plotting:
- plot functions now return figure instances

components.Tie_Point_Grid.Tie_Point_Refiner:
- _reliability_thresholding(): changed default of min_reliability to 60

coreg_cmd: changed default of '-ws' to 256

updated __version__

updated __version__

updated __version__

updated __version__

updated __version__

components.CoReg_local.COREG_LOCAL:
- added keyword 'force_quadratic_win'

components.Tie_Point_Grid.Tie_Point_Grid:
- implemented keyword 'force_quadratic_win'

coreg_cmd:
- parameter '-quadratic_win' is now working for global and local approach
- added parameter 'tieP_filter_level' for adjusting tie point filter level

updated __version__

- refactored keyword 'multiproc' to 'CPUs' -> CPUs parameter passed by COREG_LOCAL is now properly handled
- equalize_pixGrids(): added a print statement

components.CoReg_local.COREG_LOCAL:
- __init__(): updated COREG call

coreg_cmd:
- run_global_coreg() updated COREG call

- updated __version__

components.CoReg.GeoArray_CoReg:
- removed not neccessary if condition

components.CoReg_local.COREG_LOCAL:
- __init__(): edited docstring

components.Geom_Quality_Grid.Geom_Quality_Grid:
- __init__(): edited docstring

coreg_cmd:
- added new parameter '-max_points' to argparser for local coregistration

- updated __version__

components.CoReg.imParams:
- __init__():  added attribute mask_baddata
- added add_mask_bad_data()

components.CoReg.COREG:
- __init__(): implemented new keywords 'mask_baddata_ref' and 'mask_baddata_tgt'
- _get_opt_winpos_winsize(): now checks bad data mask if window position is within bad data area

components.CoReg_local.COREG_LOCAL:
- __init__(): implemented new keywords 'mask_baddata_ref' and 'mask_baddata_tgt'

components.Geom_Quality_Grid.Geom_Quality_Grid:
- get_CoRegPoints_table(): added vectorized filtering of points within bad data area
- _flag_outliers(): added docstring, some minor revisions

coreg_cmd:
- renamed parameters path_im0 and path_im1 to path_ref and path_tgt
- added parameters '-mask_ref' and '-mask_tgt' to global an local argument parser

- updated __version__

added output creation options to COREG, COREG_LOCAL and DESHIFTER (keyword 'out_crea_options'); edited some docstrings

components.CoReg.COREG:
- implemented new keyword 'out_crea_options' for specifying GDAL output creation options
- __init__(): edited docstring

components.CoReg_local.COREG_LOCAL:
- implemented new keyword 'out_crea_options' for specifying GDAL output creation options
- __init__(): edited docstring

components.DeShifter.DESHIFTER:
- implemented new keyword 'out_crea_options' for specifying GDAL output creation options

coreg_cmd:
- added parameter '-fmt_out' to global coregistration subparser as well as to COREG call

- updated __version__

components.CoReg:
- imParams:
    - removed attribute 'corner_coords' (not needed anymore)
    - imParams.poly is now directly derived from GeoArray
- COREG:
    - added keywords 'footprint_poly_ref' and 'footprint_poly_tgt'
    - refactored 'data_corners_im0' and 'data_corners_im1' to 'data_corners_ref' and 'data_corners_tgt'
    - _get_clip_window_properties(): bugfix for getting stuck within while loop

components.CoReg_local:
- COREG_LOCAL:
    - added keywords 'footprint_poly_ref' and 'footprint_poly_tgt'
    - refactored 'data_corners_im0' and 'data_corners_im1' to 'data_corners_ref' and 'data_corners_tgt'
    - added keyword 'ignore_errors' (not yet implemented completely)

components.Geom_Quality_Grid.Geom_Quality_Grid:
- get_CoRegPoints_table(): added empty GDF assertion; updated COREG kwargs

components.geometry:
- get_true_corner_mapXY(): added DeprecationWarning

coreg_cmd:
- updated calls for COREG and COREG_LOCAL
- added TODOs

components.DeShifter.DESHIFTER:
- _get_out_grid(): bugfix for negative ref_ygsd

coreg_cmd:
- edited some print outputs

components.CoReg.COREG:
- edited docstring

- renamed dsc__CoReg_Sat_FourierShiftTheorem.py to coreg_cmd.py
- updated __version__
- updated README and associated figures

components.CoReg:
- imParams: mask is now calculated from only one band -> avoids reading the whole datacube

components.CoReg_local:
- COREG_LOCAL:
    - __init__(): some docstring modifications
    - added attribute '_success'
    - property quality_grid: now shows calculated coreg points figure in verbose mode
    - view_CoRegPoints(): added outlier filtering for points in figure
    - correct_shifts(): bugfix for trying to corrects shifts without GCPs

components.Geom_Quality_Grid.Geom_Quality_Grid:
- GCPList: bugfix for running to_GCPList() twice
- get_CoRegPoints_table(): disabled verbose mode during grid calculation
- to_GCPList(): now returns an empty list if no valid matches are available

MAIN:
- major revision; added subparsers; added argparser for COREG_LOCAL
- added run_global_coreg()
- added run_local_coreg()

- updated __version__

resampling algorithms are now adjustable in COREG; bugfix for not respecting taking nodata value when de-shifting

 COREG:
 - added keywords 'resamp_alg_deshift' and 'resamp_alg_calc'
 - updated docstring
 - added warning when resampling algorithm 'average' is chosen
 - _calc_shifted_cross_power_spectrum(): bugfix for not using pyfftw even if available
 - refactored calc_subpixel_shifts() to _calc_subpixel_shifts()
 - added _dict_rspAlg_rsp_Int

 DESHIFTER:
 - refactored dict_rspAlg_rsp_Int to property _dict_rspAlg_rsp_Int
 - added 'nodata' keyword

 MAIN:
 - fixed some typos

COREG / DESHIFTER: output format is now adjustable via keyword argument; Bugfix for wrong output filename

 COREG:
 - added keyword 'fmt_out' that allows to set the output format for deshifted data
 - improved docstring
 - Bugfix for missing output filename in case COREG had been instanced with default argument for path_out

 DESHIFTER:
 - added keyword 'fmt_out' that allows to set the output format for deshifted data
 - Bugfix for missing GeoArray in deshift_results in case align_grids=False

 MAIN:
 - updated default argument of '-o' option

COREG:
- some modifications in order to ensure Python 2.7 compatibility
- pyfftw is now only imported if available

Geom_Quality_Grid:
- some modifications in order to ensure Python 2.7 compatibility

MAIN:
- CoReg_Sat root directory is automatically added to PATH
- py_tools_ds root directory is automatically added to PATH (expected to be in CoReg_Sat root directory)

COREG:
- some functions are now imported directly from py_tools_ds instead of from geometry
- moved imParamObj and COREG to new module 'CoReg'

DESHIFTER:
- some functions are now imported directly from py_tools_ds instead of from geometry
- moved DESHIFTER to new module 'DeShifter'

Geom_Quality_Grid:
- some functions are now imported directly from py_tools_ds instead of from geometry
- moved Geom_Quality_Grid to new module Geom_Quality_Grid

MAIN:
- fixed a unicode string error within arg parser
- some code style changes
- bugfix for not properly parsing '-calc_cor'
- __version__ is now imported from package.__init__

package.__init__:
- added __version__

UTL:
- removed deprecated imports

IO:
- revised some imports

GEO:
- removed all imports of functions that are not directly needed within geometry

new modules:
- CoReg
- DeShifter
- Geom_Quality_Grid

fixed a lot of incompatibilities caused by only partial revisions; some bugfixes => version now fully operable again

imParamObj:
- bugfix for not recognizing nodata values if 0
- bugfix for not setting  imParamObj.nodata in case of inmem-GeoArray
- added automatic fix of invalid footprint polygon

COREG:
- implemented new keyword argument 'path_verbose_out'
- set_outpathes(): major revision
- added calc_integer_shifts()
- added validate_integer_shifts()
- calculate_spatial_shifts(): simiplified implementation of the algorithm
- added some comments to calculate_spatial_shifts()
- get_updated_map_info(): reordered print outputs
- revised correct_shifts()
- refactored shift_image_by_updating_map_info() to _shift_image_by_updating_map_info()
- refactored align_coordinate_grids() to _align_coordinate_grids()
- refactored resample_without_grid_aligning() to _resample_without_grid_aligning()

DESHIFTER:
- implemented new keyword 'path_out'
- added object attribute self.align_grids
- correct_shifts(): added some comments and the possibility to write results to disk

Geom_Quality_Grid:     fixed some incompatibilities caused by revision of COREG and DESHIFTER; much faster multiprocessing by avoiding duplicated disk IO
- __init__():
    - added docstring to __init__()
    - implemented possibility to pass a GeoArrays as arguments to __init__()
    - some code style changes
    - added nodata attribute
- _get_imXY__mapXY_points(): revised  calculation of outer map coordinates
- revised _get_spatial_shifts(): now self don't has to be pickled anymore if called in multiprocessing -> much faster multiprocessing
- revised get_quality_grid() and implemented new call of _get_spatial_shifts()

MAIN:
- added parameter -vo (path verbose out)

- moved parts of get_true_corner_lonlat() to external packacke 'py_tools_ds'
- added imports for some more functions from 'py_tools_ds'
- added get_GeoArrayPosition_from_boxImYX()

UTL:
- added import of subcall_with_output()

COREG:
- moved class imParamObj to top-level
- implemented functionality to calculate the entire coregistration based on an array (in addition to image paths)
- added attribute tracked_errors and implemented it into COREG
- updated warp_ndarray calls
- revised coreg_info property
- added a new version of correct_shifts()

DESHIFTER:
- major revision of the whole class (it is now not based on a GMS object anymore but on a GeoArray and coreg_results)
- added function get_out_grid()
- added property grids_alignable
- added get_out_extent()
- revised correct_shifts()
- converted set_deshift_results() to property deshift_results

GEO:
- moved nearly the whole body of geometry.py to py_tools_ds (functions are now imported from there)

UTL:
- moved find_nearest() to py_tools_ds

COREG:
- fixed wrong references to IO module
- calculate_spatial_shifts(): fixed wrong calls of get_updated_map_info() and set_coreg_info()

GEO:
- updated find_nearest() calls within move_shapelyPoly_to_image_grid() and get_true_corner_lonlat()
- improved docstring for corner_coord_to_minmax()
- updated warp_ndarray(): added keyword argument 'outExtent_within'
- added transform_utm_to_wgs84()
- updated geotransform2mapinfo()

UTL:
- find_nearest(): major revision - it now supports an automatic round algorithm

COREG:
- __init__(): added some attributes in order to make it more compatible with GMS version
- added get_updated_map_info()
- added set_coreg_info()

Daniel Scheffler authored Aug 19, 2016 and Daniel Scheffler committed Aug 19, 2016

- fixed a bug in nodata assertion