CI setup now updates ci_env environment installed via docker_pyenvs instead of...

CI setup now updates ci_env environment installed via docker_pyenvs instead of creating an independent environment.

.gitlab-ci.yml

@@ -20,8 +20,8 @@ test_arosics:
   stage: test
   script:
     - source /root/miniconda3/bin/activate
-    - source activate arosics
-    - export GDAL_DATA=/root/miniconda3/envs/arosics/share/gdal
+    - source activate ci_env
+    - export GDAL_DATA=/root/miniconda3/envs/ci_env/share/gdal
     - export PYTHONPATH=$PYTHONPATH:/root  # /root <- directory needed later
     - make nosetests
     - make docs
@@ -38,8 +38,8 @@ test_styles:
   stage: test
   script:
     - source /root/miniconda3/bin/activate
-    - source activate arosics
-    - export GDAL_DATA=/root/miniconda3/envs/arosics/share/gdal
+    - source activate ci_env
+    - export GDAL_DATA=/root/miniconda3/envs/ci_env/share/gdal
     - export PYTHONPATH=$PYTHONPATH:/root  # /root <- directory needed later
 #    - pip install "pycodestyle>=2.0.0,!=2.4.0"  # TODO remove as soon as docker runner is recreated
     - make lint
@@ -59,6 +59,7 @@ test_arosics_install:
     - source activate arosics_testinstall
      # resolve some requirements with conda
     - conda install --yes -q -c conda-forge numpy gdal scikit-image matplotlib pyproj rasterio shapely geopandas
+    - conda install --yes -q -c conda-forge libgdal ncurses # Fix for libgdal installed from defaults channel causing libkea.so.1.4.7: cannot open shared object file: No such file or directory
     # run installer
     - python setup.py install
     # test if its importable
@@ -109,7 +110,7 @@ deploy_pypi:
     - test_arosics
   script:   # Configure the PyPI credentials, then push the package, and cleanup the creds.
     - source /root/miniconda3/bin/activate
-    - source activate arosics
+    - source activate ci_env
     - mkdir -p public/images/
     - cp -r docs/images/* public/images/
     - printf "[distutils]\nindex-servers =\n    pypi\n\n" >> ~/.pypirc

tests/CI_docker/context/arosics_ci.docker

-FROM gms_base_centos:latest
+FROM gms_base_centos:0.2
 
 # copy some needed stuff to /root
 COPY *.yml /root/
 
+# update the ci_env environment (that already contains all packages installed via 'docker_pyenvs' repo)
 RUN /bin/bash -i -c "\
     source /root/miniconda3/bin/activate ; \
-    conda env update -f /root/environment_arosics.yml"
+    source activate ci_env; \
+    conda env update -n ci_env -f /root/environment_arosics.yml"