CI now uses Mambaforge.

Signed-off-by: Daniel Scheffler <danschef@gfz-potsdam.de>

.gitlab-ci.yml

@@ -10,7 +10,7 @@ stages:
 test_enpt_enmapboxapp:
   stage: test
   script:
-    - source /root/miniconda3/bin/activate ci_env
+    - source /root/mambaforge/bin/activate ci_env
 
     # install enpt_enmapboxapp, otherwise the executable scripts are not in place
     - pip install -e .
@@ -27,7 +27,7 @@ test_enpt_enmapboxapp:
 
     # set environment variables
     - export IS_CI_ENV=1  # to notify tests that they are running within a docker CI system
-    - export ANACONDA_ROOT=/root/miniconda3/
+    - export ANACONDA_ROOT=/root/mambaforge/
     - export IS_ENPT_GUI_TEST=1
 
     # run nosetests
@@ -48,7 +48,7 @@ test_enpt_enmapboxapp:
 test_styles:
   stage: test
   script:
-    - source /root/miniconda3/bin/activate ci_env
+    - source /root/mambaforge/bin/activate ci_env
     - make lint
   artifacts:
     paths:
@@ -62,7 +62,7 @@ test_styles:
 test_urls:
   stage: test
   script:
-    - source /root/miniconda3/bin/activate ci_env
+    - source /root/mambaforge/bin/activate ci_env
     - pip install -U urlchecker
     - make urlcheck
   when: always
@@ -71,12 +71,10 @@ test_urls:
 test_enpt_enmapboxapp_install:
   stage: test
   script:
-    - source /root/miniconda3/bin/activate
+    - source /root/mambaforge/bin/activate
 
-    # update conda and python and update mamba
-    - conda update -n base -c conda-forge conda
-    # - conda update -c conda-forge python
-    - conda update -c conda-forge mamba
+    # update base environment
+    - mamba update -n base -c conda-forge --all
 
     # create an environment containing qgis, enpt and the EnMAP-Box requirements
     - mamba env create -f tests/gitlab_CI_docker/context/environment_enpt_enmapboxapp.yml
@@ -148,7 +146,7 @@ deploy_pypi:
   dependencies:
     - test_enpt_enmapboxapp
   script:
-    - source /root/miniconda3/bin/activate ci_env
+    - source /root/mambaforge/bin/activate ci_env
     - pip install -U twine
     - python setup.py sdist
     - twine upload dist/*  # requires creds as environment variables

tests/gitlab_CI_docker/context/enpt_enmapboxapp_ci.docker

-FROM ci_base_centos:0.1
+FROM ci_base_centos:0.2
 
 # install Xvfb to be able to assign a DISPLAY for Qt tests
 RUN yum install -y xorg-x11-server-Xvfb
@@ -6,20 +6,11 @@ RUN yum install -y xorg-x11-server-Xvfb
 # copy some needed stuff to /root
 COPY *.yml /root/
 
-# # update Miniconda
-# ENV miniconda_dl 'Miniconda3-latest-Linux-x86_64.sh'
-# RUN /bin/bash -i -c "\
-#     rm -rf /root/miniconda3 ; \
-#     wget https://repo.continuum.io/miniconda/$miniconda_dl -P /root/ ; \
-#     bash -i /root/$miniconda_dl -b ; \
-#     rm -f /root/$miniconda_dl"
-
 # update the ci_env environment (that already contains all packages installed via 'docker_pyenvs' repo)
 # -> also include packages for conda deployment and upload
 RUN /bin/bash -i -c "\
-    source /root/miniconda3/bin/activate ; \
-    conda update -n base -c conda-forge conda;\
-    conda install -c conda-forge mamba ; \
+    source /root/mambaforge/bin/activate ; \
+    mamba update -n base -c conda-forge --all;\
     conda activate ci_env; \
     mamba env update -n ci_env -f /root/environment_enpt_enmapboxapp.yml"
 
@@ -28,7 +19,7 @@ COPY enmapbox /tmp/enmapbox
 
 # install enmapbox (in pip development mode)
 RUN bash -i -c "\
-    source /root/miniconda3/bin/activate ci_env ; \
+    source /root/mambaforge/bin/activate ci_env ; \
     cd /tmp/enmapbox/ ; \
     pip install -r https://bitbucket.org/hu-geomatics/enmap-box/raw/develop/requirements.txt ; \
     pip install -e . ; \
@@ -36,7 +27,7 @@ RUN bash -i -c "\
 
 # install enpt (into separate conda environment)
 RUN bash -i -c "\
-    source /root/miniconda3/bin/activate ; \
+    source /root/mambaforge/bin/activate ; \
     mamba create -n enpt -c conda-forge enpt ; \
     conda activate enpt ; \
     conda list"